.. changelog created on Tue 29 Mar 12:30:37 BST 2022 .. include:: globals.rst |hiper| pipeline changes from v1.1.0 to v1.2.0 ************************************************** List of changes from git, newest first, with the commit keys linked to github: * `edb84f5dacdc14fb553c8ec184097d930b49a72e `_ problem_runs.py, to find problematic runs * `126041afd410e6037d51e946ee90cacc39968b41 `_ avalanche.py, finds avalanche mode runs for ultraspec * `2f547e3b41a54f1faeda61b68150a4380b74264c `_ documented new commands * `d0d824e66c99b11766fe1a63d3c206f4e3704ab9 `_ Added in pbands to standard setup files * `42393419dc42c44cff526421a613082cbd1c1d10 `_ exploss, improved documentation * `051dc23ad7078515580cd52095f1707d9e21fd16 `_ pbands, new quick-look plot routine * `4ac93bb1daf0ca6d9367f1c37296e3f00866b326 `_ exploss, added some numerical info. * `1fba90acd8176bb782f495ecffb80bfa7f957baf `_ fringe-runs fix * `da8b1eb524bb6c448e1afc618d725a6304870b55 `_ logsearch, bug fix, ignore others option * `5e2eafbfd8cdc60a2da88159dfce51298472ee84 `_ caksearch.py, several upgrades * `00bec41db64beb12c382867a6e96e194f3873492 `_ exploss -- to help judge if readout noise is significant * `b1a7052bfff335c580ae9b461b95518eead36db5 `_ changes instrument column hlogger and logsearch * `b5c84998eb8830561b42d186c84875378743b6cb `_ hlogger, added instrument name column * `fb2c616ac31d1799b8c617a70e2e61e18c19b0bb `_ calsearch, new routine to find matching calibration runs * `befc6ccab161ad98a1734ddf8978fd6408584956 `_ logsearch, added option to skip "Others" * `9840e2e56b669db86287f3e0352d7d1323e39a3c `_ hlogger, updated to so with ultracam phase II names * `d3458c4f98cb1e0ff76585e29ced262dc534919f `_ calsearch, new routine to find calibration files * `07680306ea5a8e012fc584330431c8364ebfa307 `_ logsearch, fixed bug in sql query * `ccb47e37823de53c335b08abef64d981e63ad2c1 `_ hlogger, bug fixes for airmass and retry option above all * `1c52b6c73022a315ace77947d92e1d449f50c6f3 `_ utils.target_lookup, j or J now * `b8ab0685591811552e85def408e9dc3312715d8a `_ hlog.Tseries.phase, sort now an option * `ccbb18f726053aea93b36863e6cf6359dd707d05 `_ fixed problem with logsearch not recognising new downloads * `fac17c4a0a2242d449c5fae96343e356dc59067a `_ hlogger, fixed check for number of entries in posdata * `981462dbdfc8afd3fe91c4301f21198f851fcfd1 `_ logsearch, print statement added * `7bb17b9715c0bfedcd729e9cd90b6fd0ab92e2e9 `_ extinction.py, fixed problem with negative deviants * `46ce40f34ef61cf9eeaf55f7c53dbaa1f32c8fb9 `_ logsearch, strange bug with password prompt * `3864112de52ea2c86ebe3b8055d0fb1355f9ca3b `_ Reworked the useful/README a bit. * `6fc33f2f1c4020e8fbc0080a324f4c0e150e426d `_ reorganised useful scripts directoy * `2d81bf8f70b28e8e0364fc56972c61ee24c11fe5 `_ extinction.py, script for measuring extinction * `20d7466ddf03ab7e8480e47c1b6799d5b1c1ceeb `_ hlog.py, removed irritating units from airmasses * `24026129e9c9b6412898d5637a7e85d2a15f7bde `_ hlog.py, secz to seczs bug fix * `baaa0e21db8cb7c0f31d33dae795d59c740fb992 `_ hlog.py, added airmass computation * `f6b29811f5c3064c7107b9f744e1d9596cfac205 `_ hlogger, changed column name of Delta secz * `dee963dec8018902dc4ba24da89ded3edcc48f9a `_ hlogger.py, bugs fixed * `2ebc585b88ddbe990a91d870b4e6d7b5244c92a5 `_ hlogger, added airmass info * `0e8e568103dd8c43a4e35c4709fa51dff8de4043 `_ Added keyring to list of prerequisites. * `6beafa0d75f652fc0136d15e8fc6bbd5e214b331 `_ logsearch, automated the database download * `72c55e2d602cf73928e8cccd56247ea90a14fd21 `_ hpackage, generalised behaviour * `f8237920a0392728c4de40fb26c9c4cd2ff577ab `_ hpackage, added option to pick up alternative reductions * `e6d3fa8fe552bb20dd1531579a7f5b1e1b8028b6 `_ Tseries, add clear_bitmask * `e52af38020aa281d0fb3d983554c7030fbb4d169 `_ Tseries.write, added option to skip masked data * `7876a627f87a23d8231dc45bb769133b831198cb `_ Merge branch 'master' into trm-dev * `5bf9bee400e188d84ef9d7c5ec8bfdd8d4dc0acc `_ hlogger, change to html column format * `a240e7536887fe671151ce14d350f7279c2ab8b0 `_ logging doc change * `0912e281cc0c46fe0da885306f1ab32f1278e535 `_ Merge pull request #92 from HiPERCAM/tseries_read_fix * `ee33c77d6dab7caa3626eff37399b941a2ba417a `_ fix typo in Tseries.read * `34f6d3519da2b42fd81aecf5a47362888c8d199a `_ joinup now joins up regardless of out of sync windows * `dab5608e407afb62fe0631a5dfece897d64b0447 `_ modified joinup to deal with asynchronous windows * `93f5bd57cf3c338aee988d9f1e9864f7c475f1a0 `_ changed digest to harchive * `8d66fbf5ba18329ce23e44731d3baede52373bae `_ put a try/except into hpackage to avoid joinup error * `2028dfa3e9a59fd787f8c2953a7a8ec8aef81357 `_ generalised the logsearch a bit * `39a0deb6ae967e3afb4d03cb78179a680928fda3 `_ fixed problem with latest upgrade to logsearch * `991f3628cea8fbc5226dd8b80c3c0dd5fabbee03 `_ added -m option to simply report failed names. * `a5a88de7515a891d8f0c3aa57a696e1701bd5362 `_ added mjd to tdb correction to Tseries * `c078b3335e8437fe761d1f2332809e0804ed652b `_ added options to save results to a csv file to logsearch * `b1924bc0ac50a44fbb99d3f7b49bf5a0cea723e3 `_ reduced minimum fwhm in genred * `e881e9bd98f65f9c1dcfacb3ae7fed85a104179b `_ added plotting of the max counts in plog * `db1706632c88449e541a8f077f3454149d68802c `_ cline now sets the default for the ignore value * `781022e2430bd0cda4a286b134b340afe8b04030 `_ further adjustment to docs * `bc713d7b9f6d1e8ca3ee10e5a9a49e504a02c032 `_ utils.py strips STD_ from start of target names * `f6f2d350386d489cbd8c88d6cd04c589cd9bd97a `_ doc updates to describe phase II process in the main * `bb76ebc1d62cdc41b28d0dcb168acec252e95255 `_ further tweak following change to defect file * `721e56070fb4a03bf5dfb511a349828c5f6f4806 `_ new hipercam defects file following Vik's cleaning of CCD 2 * `0c0c89d67383ee5a7d88bcf7bcd5328f1b03bf33 `_ changelog for a single tag was not reporting its name * `5e6ab55b1121d449d7acbc0aed3b6cff9506d341 `_ many fixes for genred's template file option * `bab87543e02c3997e2dafb9cd7139ac1a4435c8d `_ expanded range of boolean inputs for reduce files * `a083e5f6da7a99e63615cf1a96f0a2d56b59ed89 `_ fixed invalid keyword in template part of genred * `c8fc24b243ff9540f99d12bcddbb943143d3380b `_ got working version of logsearch * `80c9bfe8b4a0109aeee454f3e83de9fc0750349d `_ generalised the ignore option in cline * `437bbce5f6bd1ca901a075a6cf8058b679ba858e `_ array index fix, redplt * `98e379ee0a3683b36756415c5d6bf6828556bd14 `_ adjusted recent changes to redplt * `7b6b62da593acb9649baf25339603dd305df456f `_ fixed bugs to do with a single CCD * `eac66b1903acdb2a29d913ae8190a6e06f64f3d9 `_ horrible numpy/python issue in hlog.py * `f720d87afb5268bb91318065772151e80b2cb09a `_ typo fixes to genred from James Wild * `1ffe1c1ee9528a9193cd6422b090fbe4a28c48de `_ fixed some backwards compatibility issues * `8178c05c5752848e5ff9157cfcf03b82349a7bd9 `_ placed limit on urllib3 version for security * `629764b779f1981b0857a8ff9f31b27f5f15db24 `_ updated logsearch to work with database files * `eb703a1d056a3eec2a2a2a584b8f3d3d5b796300 `_ changed how redplt makes figures * `6644a33292b9e02d29c6594894b10e070a5abf7a `_ added "import warnings" to genred * `469888447d1d069a2ba67e7d506b7b9fe1e788d6 `_ revised the way in which redplt makes plots * `5c00ae56b84a214f635cb9a111cd3de97c2e1f7f `_ attempt to fix genred problem using template file * `4a7433a5abcdd4a878bf1bdd6fa0bf0b077466e1 `_ fixed hlogger bug in accessing phase II data. * `d66e07d7ab00636815002b7f767f8999999c68c2 `_ added some info about plog in docs * `53a8ae0ec07199ff776ac71cdcf4c752c28f2f84 `_ series of stupid bugs following withdrawal of Hlog.read * `51965e36cc507f860645027ee4b4608d5b5764d1 `_ docs update for ncal and setdefect * `b16a14257b2c33b0cc6ed3f7e92458abb0a83e9f `_ updated the way changelog works * `a9fe69118923283d63e5c216061ef4b2d4b9f795 `_ doc changes, now track api! * `fa4c9c34c24cf8e3c8521e927f3b11fb96139a33 `_ documentation of ncal * `324a5737fc9b7771266d3d78af1dccf08d03b6a6 `_ new routine ncal for noise calibration * `1ec0c2d1438bda92638746d5e8f68c3851e3cdc9 `_ and more doc updates * `1ddd80fb4c91a932ac9e3e94525b40bc41549760 `_ doc updates to reduction.rst * `67454220cf15f77190012960707b06f5c3bb9562 `_ doc updates * `a3cc8d4bd9d0c5cf53ae8d822171c203d00251f8 `_ a bit more documentation in setdefect * `699fe717ac727331d8606160528a578d44402168 `_ hot pixels defects implemented properly * `237718b21e451014349ea452d4c9914528b6dcfc `_ tweaked hist a bit * `470875a226a72877171a9394d5b44eaafd9b61f1 `_ fixed two bugs in genred for inst=other * `b9c50394cab8f865c6931fe92285c539158439d1 `_ the new defect file * `359d6687f0a06837b3cf2e5da6a74ec8f22e0104 `_ updated hipercam defect file * `48be2fcd6b0f6c3ae12dae20ec5a93614f0b9b28 `_ removed enforcement of plot limits from multiple routines * `4ddc1ab85e1a591a5322d1d143063bdd2f556298 `_ micro re-format, jtrawl * `7be56e25dea4e561099a27dd0ed7800d3034b598 `_ now looks for phase II position data as a last resort * `79eaac7b639d67bfa932483cce3cede9b7ba7ab2 `_ removed full recompute option from hmeta * `bd93b605c348c33424a1d3f736ec6bf51f1be4c5 `_ fixed bugs in hmeta for hipercam * `cb7660e7b6799cde0b5896f71372243de563557c `_ usual time stamp update * `2822c977bc20d8c492902c2e017c6692e87a0f86 `_ Merge branch 'trm-dev' * `aec3ec2df7e5033c76ba91822bee17db6206333d `_ another micro-tweak on genred * `4a9767db2eee9c9970fea689eb7f245cd4330bde `_ finer-grained control in genred * `8982ffb76fbea506132e0d4ec5b595a5f88c79c3 `_ small tweaks to default fit params in genred * `dae90f1971044da5eef3ef479d4b9d9e01c74688 `_ latest change log * `18657e2899421bbc1d3c79788409f7b183cc2cf2 `_ doc updates following latest release